A Minimal Book Example
1
Prerequisites
2
Statistics
3
Dplyr
3.1
Select columns
3.2
Filter rows by condition
3.3
Slice rows by index
3.4
Adding rows and columns
3.5
Remove duplicates
3.6
Grouping and aggregation
3.7
Operations on several data frames
3.8
Join functions
3.9
Miscellaneous
3.10
Adding rows and columns
3.11
Remove duplicates
3.12
Select
3.13
Filter rows
3.14
Summarize
3.15
Sort
3.16
Pipes
3.17
Combine data
3.18
‘by’ is a common variable (primary key) to join by.
3.19
Nested If_Else
3.20
if() Family of Functions
3.21
TODO
3.22
Vectorize functions to columns
3.23
How to …
3.23.1
Convert empty spaces to NA
3.23.2
Randomly select n rows
3.24
Sources
4
Analyis of new generation sequencing data in R
4.1
Get fastq from SRA
5
Get fastq from SRA database
5.1
Get fastq from SRA database
References
Published with bookdown
A Minimal Book Example
Chapter 4
Analyis of new generation sequencing data in R
4.1
Get fastq from SRA